HL_5ZEU_013

3D structure

PDB id

5ZEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEU_013 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.2326

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

5ZEU|1|a|C|502
5ZEU|1|a|A|503
5ZEU|1|a|G|504
5ZEU|1|a|C|505
5ZEU|1|a|C|506
5ZEU|1|a|G|507

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12