HL_5ZEY_004
3D structure
- PDB id
- 5ZEY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis Trans-translation state 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.5 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ZEY_004 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1079
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
5ZEY|1|B|G|32
5ZEY|1|B|C|33
5ZEY|1|B|U|34
5ZEY|1|B|C|35
5ZEY|1|B|A|36
5ZEY|1|B|U|37
5ZEY|1|B|A|38
5ZEY|1|B|A|39
5ZEY|1|B|C|40
Current chains
- Chain B
- A-tRNAfMet
Nearby chains
- Chain A
- Transfer-messenger RNA; tmRNA
Coloring options: