HL_6AHD_005

3D structure

PDB id

6AHD (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUAUUGCAGUACCUC

Length

15 nucleotides

Bulged bases

6AHD|1|H|C|164, 6AHD|1|H|U|167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AHD|1|H|G|158
6AHD|1|H|U|159
6AHD|1|H|A|160
6AHD|1|H|U|161
6AHD|1|H|U|162
6AHD|1|H|G|163
6AHD|1|H|C|164
6AHD|1|H|A|165
6AHD|1|H|G|166
6AHD|1|H|U|167
6AHD|1|H|A|168
6AHD|1|H|C|169
6AHD|1|H|C|170
6AHD|1|H|U|171
6AHD|1|H|C|172

Current chains

Chain H

U2snRNA

Nearby chains

Chain n

Small nuclear ribonucleoprotein G

Chain p

U2 small nuclear ribonucleoprotein B''