HL_6AHD_006
3D structure
- PDB id
- 6AHD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUCUAUC
- Length
- 7 nucleotides
- Bulged bases
- 6AHD|1|I|U|36, 6AHD|1|I|C|37, 6AHD|1|I|U|38, 6AHD|1|I|U|40
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AHD|1|I|G|35
6AHD|1|I|U|36
6AHD|1|I|C|37
6AHD|1|I|U|38
6AHD|1|I|A|39
6AHD|1|I|U|40
6AHD|1|I|C|41
Current chains
- Chain I
- U4snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain L
- U4/U6 small nuclear ribonucleoprotein Prp31
- Chain M
- NHP2-like protein 1
- Chain N
- Pre-mRNA-processing factor 6
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