HL_6ASO_001

3D structure

PDB id

6ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast U6 snRNP with 3'-phosphate terminated U6 RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.71 Å

Loop

Sequence

UGCAUAA

Length

7 nucleotides

Bulged bases

6ASO|1|I|A|73

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6ASO|1|I|U|70
6ASO|1|I|G|71
6ASO|1|I|C|72
6ASO|1|I|A|73
6ASO|1|I|U|74
6ASO|1|I|A|75
6ASO|1|I|A|76

Current chains

Chain I

Saccharomyces cerevisiae strain HB_S_GIMBLETTROAD_9 chromosome XII sequence

Nearby chains