HL_6AWB_011

3D structure

PDB id

6AWB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6AWB|1|A|U|421, 6AWB|1|A|C|422

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6AWB_011 not in the Motif Atlas

Homologous match to HL_6CZR_082

Geometric discrepancy: 0.5664

The information below is about HL_6CZR_082

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

6AWB|1|A|C|419
6AWB|1|A|U|420
6AWB|1|A|U|421
6AWB|1|A|C|422
6AWB|1|A|G|423
6AWB|1|A|G|424

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

30S ribosomal protein S3

Chain G

30S ribosomal protein S4