HL_6B46_001
3D structure
- PDB id
- 6B46 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGCCGUGUAGGCAG
- Length
- 15 nucleotides
- Bulged bases
- 6B46|1|M|U|52, 6B46|1|M|U|54, 6B46|1|M|G|57, 6B46|1|M|C|58, 6B46|1|M|A|59
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6B46_001 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.3794
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
6B46|1|M|C|46
6B46|1|M|U|47
6B46|1|M|G|48
6B46|1|M|C|49
6B46|1|M|C|50
6B46|1|M|G|51
6B46|1|M|U|52
6B46|1|M|G|53
6B46|1|M|U|54
6B46|1|M|A|55
6B46|1|M|G|56
6B46|1|M|G|57
6B46|1|M|C|58
6B46|1|M|A|59
6B46|1|M|G|60
Current chains
- Chain M
- Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence
Nearby chains
- Chain C
- CRISPR-associated protein Csy3
- Chain L
- CRISPR-associated endonuclease Cas6/Csy4
Coloring options: