HL_6BOK_043
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 6BOK|1|B|G|329, 6BOK|1|B|A|330, 6BOK|1|B|A|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOK_043 not in the Motif Atlas
- Homologous match to HL_7RQB_012
- Geometric discrepancy: 0.0779
- The information below is about HL_7RQB_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_08002.9
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 19
Unit IDs
6BOK|1|B|G|327
6BOK|1|B|U|328
6BOK|1|B|G|329
6BOK|1|B|A|330
6BOK|1|B|A|331
6BOK|1|B|A|332
6BOK|1|B|G|333
6BOK|1|B|C|334
6BOK|1|B|C|335
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L4
- Chain V
- 50S ribosomal protein L24
Coloring options: