HL_6BOK_084
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 6BOK|1|B|G|2250
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOK_084 not in the Motif Atlas
- Homologous match to HL_7RQB_053
- Geometric discrepancy: 0.0952
- The information below is about HL_7RQB_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6BOK|1|B|C|2248
6BOK|1|B|U|2249
6BOK|1|B|G|2250
6BOK|1|B|OMG|2251
6BOK|1|B|G|2252
6BOK|1|B|G|2253
6BOK|1|B|C|2254
6BOK|1|B|G|2255
6BOK|1|B|G|2256
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain GD
- Peptide chain release factor 1
- Chain IA
- Small subunit ribosomal RNA fragment; SSU rRNA fragment
- Chain N
- 50S ribosomal protein L16
- Chain X
- 50S ribosomal protein L27
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