HL_6BOK_106
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOK_106 not in the Motif Atlas
- Geometric match to HL_4LFB_001
- Geometric discrepancy: 0.0718
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_31940.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6BOK|1|DB|U|12
6BOK|1|DB|U|13
6BOK|1|DB|U|14
6BOK|1|DB|G|15
6BOK|1|DB|A|16
6BOK|1|DB|U|17
6BOK|1|DB|C|18
6BOK|1|DB|C|19
6BOK|1|DB|U|20
6BOK|1|DB|G|21
6BOK|1|DB|G|22
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain KC
- mRNA
- Chain PC
- 30S ribosomal protein S5
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