HL_6BOK_113
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CACUGAGACACGGG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOK_113 not in the Motif Atlas
- Geometric match to HL_4LFB_008
- Geometric discrepancy: 0.0922
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6BOK|1|DB|C|320
6BOK|1|DB|A|321
6BOK|1|DB|C|322
6BOK|1|DB|U|323
6BOK|1|DB|G|324
6BOK|1|DB|A|325
6BOK|1|DB|G|326
6BOK|1|DB|A|327
6BOK|1|DB|C|328
6BOK|1|DB|A|329
6BOK|1|DB|C|330
6BOK|1|DB|G|331
6BOK|1|DB|G|332
6BOK|1|DB|G|333
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain AD
- 30S ribosomal protein S16
- Chain ED
- 30S ribosomal protein S20
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