HL_6BOK_174
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CCCGUACGGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOK_174 not in the Motif Atlas
- Geometric match to HL_1FIR_001
- Geometric discrepancy: 0.3555
- The information below is about HL_1FIR_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 18
Unit IDs
6BOK|1|EB|C|1531
6BOK|1|EB|C|1532
6BOK|1|EB|C|1533
6BOK|1|EB|G|1534
6BOK|1|EB|U|1535
6BOK|1|EB|A|1536
6BOK|1|EB|C|1537
6BOK|1|EB|G|1538
6BOK|1|EB|G|1539
6BOK|1|EB|G|1540
Current chains
- Chain EB
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: