Loop HL_6BOK

3D structure

PDB id: 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
Description: E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å

Loop

Sequence: UGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCA
Length: 55 nucleotides
Bulged bases: 6BOK|1|B|U|2130, 6BOK|1|B|U|2132, 6BOK|1|B|C|2145
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6BOK|1|B|U|2122
6BOK|1|B|G|2123
6BOK|1|B|G|2124
6BOK|1|B|G|2125
6BOK|1|B|A|2126
6BOK|1|B|G|2127
6BOK|1|B|C|2128
6BOK|1|B|C|2129
6BOK|1|B|U|2130
6BOK|1|B|G|2131
6BOK|1|B|U|2132
6BOK|1|B|G|2133
6BOK|1|B|A|2134
6BOK|1|B|A|2135
6BOK|1|B|C|2136
6BOK|1|B|C|2137
6BOK|1|B|C|2138
6BOK|1|B|C|2139
6BOK|1|B|C|2140
6BOK|1|B|G|2141
6BOK|1|B|C|2142
6BOK|1|B|C|2143
6BOK|1|B|U|2144
6BOK|1|B|C|2145
6BOK|1|B|C|2146
6BOK|1|B|G|2147
6BOK|1|B|G|2148
6BOK|1|B|G|2149
6BOK|1|B|U|2150
6BOK|1|B|G|2151
6BOK|1|B|G|2152
6BOK|1|B|G|2153
6BOK|1|B|G|2154
6BOK|1|B|G|2155
6BOK|1|B|G|2156
6BOK|1|B|G|2157
6BOK|1|B|A|2158
6BOK|1|B|G|2159
6BOK|1|B|G|2160
6BOK|1|B|C|2161
6BOK|1|B|G|2162
6BOK|1|B|C|2163
6BOK|1|B|C|2164
6BOK|1|B|G|2165
6BOK|1|B|G|2166
6BOK|1|B|U|2167
6BOK|1|B|G|2168
6BOK|1|B|A|2169
6BOK|1|B|A|2170
6BOK|1|B|A|2171
6BOK|1|B|U|2172
6BOK|1|B|A|2173
6BOK|1|B|C|2174
6BOK|1|B|C|2175
6BOK|1|B|A|2176

Current chains

Chain B: 23S ribosomal RNA

Nearby chains

Chain D: Small subunit ribosomal RNA fragment; SSU rRNA fragment
Chain SA: 30S ribosomal protein S11

HL_6BOK_223