HL_6BUW_008

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BUW_008 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0884

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6BUW|1|QA|C|320
6BUW|1|QA|A|321
6BUW|1|QA|C|322
6BUW|1|QA|U|323
6BUW|1|QA|G|324
6BUW|1|QA|A|325
6BUW|1|QA|G|326
6BUW|1|QA|A|327
6BUW|1|QA|C|328
6BUW|1|QA|A|329
6BUW|1|QA|C|330
6BUW|1|QA|G|331
6BUW|1|QA|G|332
6BUW|1|QA|G|333

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16

Chain QT

30S ribosomal protein S20