HL_6BUW_012

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

6BUW|1|QA|C|466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BUW_012 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.1834

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

6BUW|1|QA|C|458
6BUW|1|QA|G|464
6BUW|1|QA|A|465
6BUW|1|QA|C|466
6BUW|1|QA|G|467
6BUW|1|QA|A|468
6BUW|1|QA|G|474

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16