HL_6BUW_125

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

6BUW|1|XA|U|841

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BUW_125 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.5627

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

6BUW|1|XA|G|837
6BUW|1|XA|G|838
6BUW|1|XA|U|841
6BUW|1|XA|C|842
6BUW|1|XA|U|843
6BUW|1|XA|C|848
6BUW|1|XA|C|849

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XB

30S ribosomal protein S2

Chain XR

30S ribosomal protein S18