3D structure

PDB id
6BUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
GAUCAGCCAUGC
Length
12 nucleotides
Bulged bases
6BUW|1|XA|U|1364
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BUW_137 not in the Motif Atlas
Homologous match to HL_4LFB_030
Geometric discrepancy: 0.1081
The information below is about HL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06226.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

6BUW|1|XA|G|1356
6BUW|1|XA|A|1357
6BUW|1|XA|U|1358
6BUW|1|XA|C|1359
6BUW|1|XA|A|1360
6BUW|1|XA|G|1361
6BUW|1|XA|C|1362
6BUW|1|XA|C|1362|||A
6BUW|1|XA|A|1363
6BUW|1|XA|U|1364
6BUW|1|XA|G|1365
6BUW|1|XA|C|1366

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XC
30S ribosomal protein S3
Chain XI
30S ribosomal protein S9
Chain XJ
30S ribosomal protein S10
Chain XM
30S ribosomal protein S13
Chain XN
30S ribosomal protein S14 type Z
Chain XU
30S ribosomal protein Thx

Coloring options:


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