HL_6BUW_142
3D structure
- PDB id
- 6BUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BUW_142 not in the Motif Atlas
- Homologous match to HL_4YCO_003
- Geometric discrepancy: 0.0956
- The information below is about HL_4YCO_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
6BUW|1|XV|G|54
6BUW|1|XV|U|55
6BUW|1|XV|U|56
6BUW|1|XV|C|57
6BUW|1|XV|A|58
6BUW|1|XV|A|59
6BUW|1|XV|A|60
6BUW|1|XV|U|61
6BUW|1|XV|C|62
Current chains
- Chain XV
- P-site tRNA fMet
Nearby chains
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
- Chain YG
- 50S ribosomal protein L5
- Chain YQ
- 50S ribosomal protein L16
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