HL_6BUW_201

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BUW_201 not in the Motif Atlas

Homologous match to HL_7A0S_057

Geometric discrepancy: 0.0883

The information below is about HL_7A0S_057

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

6BUW|1|YA|C|2374
6BUW|1|YA|G|2375
6BUW|1|YA|A|2376
6BUW|1|YA|A|2377
6BUW|1|YA|A|2378
6BUW|1|YA|G|2379

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y6

50S ribosomal protein L33

Chain YS

50S ribosomal protein L18