3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CAGCCG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ6_013 not in the Motif Atlas
Geometric match to HL_5J7L_143
Geometric discrepancy: 0.2628
The information below is about HL_5J7L_143
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

6BZ6|1|QA|C|522
6BZ6|1|QA|A|523
6BZ6|1|QA|G|524
6BZ6|1|QA|C|525
6BZ6|1|QA|C|526
6BZ6|1|QA|G|527

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QL
30S ribosomal protein S12

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1879 s