HL_6BZ6_014

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

6BZ6|1|QA|U|619

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_014 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.1364

The information below is about HL_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6BZ6|1|QA|G|617
6BZ6|1|QA|C|618
6BZ6|1|QA|U|619
6BZ6|1|QA|C|620
6BZ6|1|QA|A|621
6BZ6|1|QA|A|622
6BZ6|1|QA|C|623

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QD

30S ribosomal protein S4

Chain QP

30S ribosomal protein S16