HL_6BZ6_018

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

6BZ6|1|QA|U|841, 6BZ6|1|QA|U|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_018 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.3318

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

6BZ6|1|QA|G|837
6BZ6|1|QA|G|838
6BZ6|1|QA|U|841
6BZ6|1|QA|C|842
6BZ6|1|QA|U|843
6BZ6|1|QA|C|848
6BZ6|1|QA|C|849

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QB

30S ribosomal protein S2

Chain QR

30S ribosomal protein S18