HL_6BZ6_071

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6BZ6|1|RA|U|1396, 6BZ6|1|RA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_071 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1099

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6BZ6|1|RA|G|1389
6BZ6|1|RA|U|1390
6BZ6|1|RA|U|1391
6BZ6|1|RA|A|1392
6BZ6|1|RA|A|1393
6BZ6|1|RA|U|1394
6BZ6|1|RA|A|1395
6BZ6|1|RA|U|1396
6BZ6|1|RA|U|1397
6BZ6|1|RA|C|1398

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RX

50S ribosomal protein L23