3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GGUAAGUUC
Length
9 nucleotides
Bulged bases
6BZ6|1|RA|U|1955
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ6_085 not in the Motif Atlas
Homologous match to HL_7RQB_049
Geometric discrepancy: 0.1727
The information below is about HL_7RQB_049
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_51824.1
Basepair signature
cWW-F-F-tSH-F-F
Number of instances in this motif group
8

Unit IDs

6BZ6|1|RA|G|1949
6BZ6|1|RA|G|1950
6BZ6|1|RA|U|1951
6BZ6|1|RA|A|1952
6BZ6|1|RA|A|1953
6BZ6|1|RA|G|1954
6BZ6|1|RA|U|1955
6BZ6|1|RA|U|1956
6BZ6|1|RA|C|1957

Current chains

Chain RA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA
Chain RO
50S ribosomal protein L14

Coloring options:


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