HL_6BZ6_115

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_115 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.1037

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6BZ6|1|XA|C|320
6BZ6|1|XA|A|321
6BZ6|1|XA|C|322
6BZ6|1|XA|U|323
6BZ6|1|XA|G|324
6BZ6|1|XA|A|325
6BZ6|1|XA|G|326
6BZ6|1|XA|A|327
6BZ6|1|XA|C|328
6BZ6|1|XA|A|329
6BZ6|1|XA|C|330
6BZ6|1|XA|G|331
6BZ6|1|XA|G|332
6BZ6|1|XA|G|333

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16

Chain XT

30S ribosomal protein S20