3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CACUGAGACACGGG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ6_115 not in the Motif Atlas
Homologous match to HL_4LFB_008
Geometric discrepancy: 0.1037
The information below is about HL_4LFB_008
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_81205.3
Basepair signature
cWW-cWW-tWH-F-tWH-F-F-F-F-F
Number of instances in this motif group
2

Unit IDs

6BZ6|1|XA|C|320
6BZ6|1|XA|A|321
6BZ6|1|XA|C|322
6BZ6|1|XA|U|323
6BZ6|1|XA|G|324
6BZ6|1|XA|A|325
6BZ6|1|XA|G|326
6BZ6|1|XA|A|327
6BZ6|1|XA|C|328
6BZ6|1|XA|A|329
6BZ6|1|XA|C|330
6BZ6|1|XA|G|331
6BZ6|1|XA|G|332
6BZ6|1|XA|G|333

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XP
30S ribosomal protein S16
Chain XT
30S ribosomal protein S20

Coloring options:


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