HL_6BZ6_129

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

UGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_129 not in the Motif Atlas

Homologous match to HL_4LFB_022

Geometric discrepancy: 0.116

The information below is about HL_4LFB_022

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6BZ6|1|XA|U|1012
6BZ6|1|XA|G|1013
6BZ6|1|XA|A|1014
6BZ6|1|XA|A|1015
6BZ6|1|XA|A|1016
6BZ6|1|XA|G|1017

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

30S ribosomal protein S14 type Z

Chain XS

30S ribosomal protein S19