HL_6BZ6_148

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

6BZ6|1|YA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_148 not in the Motif Atlas

Homologous match to HL_7RQB_006

Geometric discrepancy: 0.1104

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

6BZ6|1|YA|G|194
6BZ6|1|YA|A|195
6BZ6|1|YA|A|196
6BZ6|1|YA|A|197
6BZ6|1|YA|C|198
6BZ6|1|YA|A|199
6BZ6|1|YA|U|200
6BZ6|1|YA|C|201

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15