HL_6BZ6_150

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_150 not in the Motif Atlas

Homologous match to HL_7RQB_008

Geometric discrepancy: 0.0834

The information below is about HL_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67216.7

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

9

Unit IDs

6BZ6|1|YA|C|246
6BZ6|1|YA|G|247
6BZ6|1|YA|G|248
6BZ6|1|YA|C|249
6BZ6|1|YA|G|250
6BZ6|1|YA|A|251
6BZ6|1|YA|G|252

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain Y8

50S ribosomal protein L35

Chain YP

50S ribosomal protein L15