HL_6BZ6_155

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GUUCGUGGAGC

Length

11 nucleotides

Bulged bases

6BZ6|1|YA|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_155 not in the Motif Atlas

Homologous match to HL_7RQB_013

Geometric discrepancy: 0.0847

The information below is about HL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6BZ6|1|YA|G|382
6BZ6|1|YA|U|383
6BZ6|1|YA|U|384
6BZ6|1|YA|C|385
6BZ6|1|YA|G|386
6BZ6|1|YA|U|387
6BZ6|1|YA|G|388
6BZ6|1|YA|G|389
6BZ6|1|YA|A|390
6BZ6|1|YA|G|391
6BZ6|1|YA|C|392

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15