HL_6BZ6_156

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

6BZ6|1|YA|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_156 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.0919

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

6BZ6|1|YA|G|410
6BZ6|1|YA|G|411
6BZ6|1|YA|A|412
6BZ6|1|YA|C|413
6BZ6|1|YA|C|414
6BZ6|1|YA|A|415
6BZ6|1|YA|C|416
6BZ6|1|YA|C|417

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YP

50S ribosomal protein L15