HL_6BZ6_222

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CCCUUGGG

Length

8 nucleotides

Bulged bases

6BZ6|1|XA|U|189, 6BZ6|1|XA|G|190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_222 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3328

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

6BZ6|1|XA|C|186|||E
6BZ6|1|XA|C|186|||F
6BZ6|1|XA|C|187
6BZ6|1|XA|U|188
6BZ6|1|XA|U|189
6BZ6|1|XA|G|190
6BZ6|1|XA|G|191|||A
6BZ6|1|XA|G|191|||B

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XQ

30S ribosomal protein S17

Chain XT

30S ribosomal protein S20