3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GAUCAGCCAUGC
Length
12 nucleotides
Bulged bases
6BZ7|1|QA|U|1364
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ7_030 not in the Motif Atlas
Homologous match to HL_4LFB_030
Geometric discrepancy: 0.1329
The information below is about HL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06226.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

6BZ7|1|QA|G|1356
6BZ7|1|QA|A|1357
6BZ7|1|QA|U|1358
6BZ7|1|QA|C|1359
6BZ7|1|QA|A|1360
6BZ7|1|QA|G|1361
6BZ7|1|QA|C|1362
6BZ7|1|QA|C|1362|||A
6BZ7|1|QA|A|1363
6BZ7|1|QA|U|1364
6BZ7|1|QA|G|1365
6BZ7|1|QA|C|1366

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QI
30S ribosomal protein S9
Chain QJ
30S ribosomal protein S10
Chain QM
30S ribosomal protein S13
Chain QN
30S ribosomal protein S14 type Z
Chain QU
30S ribosomal protein Thx

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2221 s