HL_6BZ7_160

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GUGAAAGCC

Length

9 nucleotides

Bulged bases

6BZ7|1|YA|G|329, 6BZ7|1|YA|A|330, 6BZ7|1|YA|A|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ7_160 not in the Motif Atlas

Homologous match to HL_7RQB_012

Geometric discrepancy: 0.1041

The information below is about HL_7RQB_012

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_08002.9

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

19

Unit IDs

6BZ7|1|YA|G|327
6BZ7|1|YA|U|328
6BZ7|1|YA|G|329
6BZ7|1|YA|A|330
6BZ7|1|YA|A|331
6BZ7|1|YA|A|332
6BZ7|1|YA|G|333
6BZ7|1|YA|C|334
6BZ7|1|YA|C|335

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YF

50S ribosomal protein L4

Chain YY

50S ribosomal protein L24