HL_6BZ8_029

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CUGCAACCCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ8_029 not in the Motif Atlas

Homologous match to HL_4LFB_029

Geometric discrepancy: 0.1519

The information below is about HL_4LFB_029

Detailed Annotation

T-loop with 3 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_93658.1

Basepair signature

cWW-tWH-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6BZ8|1|QA|C|1314
6BZ8|1|QA|U|1315
6BZ8|1|QA|G|1316
6BZ8|1|QA|C|1317
6BZ8|1|QA|A|1318
6BZ8|1|QA|A|1319
6BZ8|1|QA|C|1320
6BZ8|1|QA|C|1321
6BZ8|1|QA|C|1322
6BZ8|1|QA|G|1323

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QN

30S ribosomal protein S14 type Z

Chain QS

30S ribosomal protein S19