HL_6BZ8_108

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

6BZ8|1|RA|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ8_108 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.0506

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6BZ8|1|RA|G|2819
6BZ8|1|RA|A|2820
6BZ8|1|RA|A|2821
6BZ8|1|RA|G|2822
6BZ8|1|RA|A|2823
6BZ8|1|RA|C|2824
6BZ8|1|RA|C|2825
6BZ8|1|RA|A|2826
6BZ8|1|RA|C|2827

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RR

50S ribosomal protein L17