3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
GAUCAGCCAUGC
Length
12 nucleotides
Bulged bases
6BZ8|1|XA|U|1364
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ8_141 not in the Motif Atlas
Homologous match to HL_4LFB_030
Geometric discrepancy: 0.1079
The information below is about HL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06226.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

6BZ8|1|XA|G|1356
6BZ8|1|XA|A|1357
6BZ8|1|XA|U|1358
6BZ8|1|XA|C|1359
6BZ8|1|XA|A|1360
6BZ8|1|XA|G|1361
6BZ8|1|XA|C|1362
6BZ8|1|XA|C|1362|||A
6BZ8|1|XA|A|1363
6BZ8|1|XA|U|1364
6BZ8|1|XA|G|1365
6BZ8|1|XA|C|1366

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XI
30S ribosomal protein S9
Chain XJ
30S ribosomal protein S10
Chain XM
30S ribosomal protein S13
Chain XN
30S ribosomal protein S14 type Z
Chain XU
30S ribosomal protein Thx

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.447 s