HL_6BZ8_177

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GCCCACCAGC

Length

10 nucleotides

Bulged bases

6BZ8|1|YA|C|888

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ8_177 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.4694

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BZ8|1|YA|G|883
6BZ8|1|YA|C|884
6BZ8|1|YA|C|885
6BZ8|1|YA|C|886
6BZ8|1|YA|A|887
6BZ8|1|YA|C|888
6BZ8|1|YA|C|889
6BZ8|1|YA|A|890
6BZ8|1|YA|G|892
6BZ8|1|YA|C|893

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XM

30S ribosomal protein S13

Chain XS

30S ribosomal protein S19