3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
CUAAAAGGUAACG
Length
13 nucleotides
Bulged bases
6BZ8|1|YA|A|2268, 6BZ8|1|YA|C|2275
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ8_206 not in the Motif Atlas
Homologous match to HL_4WF9_050
Geometric discrepancy: 0.0911
The information below is about HL_4WF9_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91939.2
Basepair signature
cWW-tSH-tHH-tWW-F-F-F
Number of instances in this motif group
8

Unit IDs

6BZ8|1|YA|C|2264
6BZ8|1|YA|U|2265
6BZ8|1|YA|A|2266
6BZ8|1|YA|A|2267
6BZ8|1|YA|A|2268
6BZ8|1|YA|A|2269
6BZ8|1|YA|G|2270
6BZ8|1|YA|G|2271
6BZ8|1|YA|U|2272
6BZ8|1|YA|A|2273
6BZ8|1|YA|A|2274
6BZ8|1|YA|C|2275
6BZ8|1|YA|G|2276

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y0
50S ribosomal protein L27
Chain YQ
50S ribosomal protein L16

Coloring options:


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