3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
GGCUCAUAACC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ8_237 not in the Motif Atlas
Homologous match to HL_4WZD_209
Geometric discrepancy: 0.3037
The information below is about HL_4WZD_209
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BZ8|1|XW|G|31
6BZ8|1|XW|G|32
6BZ8|1|XW|C|33
6BZ8|1|XW|U|34
6BZ8|1|XW|C|35
6BZ8|1|XW|A|36
6BZ8|1|XW|U|37
6BZ8|1|XW|A|38
6BZ8|1|XW|A|39
6BZ8|1|XW|C|40
6BZ8|1|XW|C|41

Current chains

Chain XW
tRNA fMet

Nearby chains

Chain XA
Small subunit ribosomal RNA; SSU rRNA
Chain XG
30S ribosomal protein S7
Chain XK
30S ribosomal protein S11
Chain XV
Transfer RNA; tRNA
Chain XX
messenger RNA

Coloring options:


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