HL_6C0F_024

3D structure

PDB id

6C0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast nucleolar pre-60S ribosomal subunit (state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUGUGCAUUG

Length

10 nucleotides

Bulged bases

6C0F|1|1|U|3078, 6C0F|1|1|U|3079

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6C0F|1|1|C|3063
6C0F|1|1|U|3064
6C0F|1|1|G|3065
6C0F|1|1|U|3066
6C0F|1|1|G|3075
6C0F|1|1|C|3076
6C0F|1|1|A|3077
6C0F|1|1|U|3078
6C0F|1|1|U|3079
6C0F|1|1|G|3080

Current chains

Chain 1

Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA

Nearby chains

Chain v

Ribosome biogenesis protein SSF1