HL_6C4I_102
3D structure
- PDB id
- 6C4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Conformation of methylated GGQ in the peptidyl transferase center during translation termination
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- G(2MG)G(MA6)(MA6)C
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- 1517G
- QA status
- Modified nucleotides: 2MG, MA6
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6C4I_102 not in the Motif Atlas
- Homologous match to HL_6CZR_103
- Geometric discrepancy: 0.0785
- The information below is about HL_6CZR_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6C4I|1|a|G|1515
6C4I|1|a|2MG|1516
6C4I|1|a|G|1517
6C4I|1|a|MA6|1518
6C4I|1|a|MA6|1519
6C4I|1|a|C|1520
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: