HL_6CAO_009

3D structure

PDB id

6CAO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosomal decoding complex at ambient temperature

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6CAO|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CAO_009 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.1655

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

6CAO|1|A|C|342
6CAO|1|A|U|343
6CAO|1|A|A|344
6CAO|1|A|C|345
6CAO|1|A|G|346
6CAO|1|A|G|347

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains