HL_6CB3_004
3D structure
- PDB id
- 6CB3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.89 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
6CB3|1|B|G|20
6CB3|1|B|G|21
6CB3|1|B|A|22
6CB3|1|B|A|23
6CB3|1|B|A|24
6CB3|1|B|C|25
Current chains
- Chain B
- RNA (99-MER)
Nearby chains
No other chains within 10ÅColoring options: