HL_6CFJ_025

3D structure

PDB id

6CFJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

6CFJ|1|1A|C|935, 6CFJ|1|1A|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFJ|1|1A|C|931
6CFJ|1|1A|C|932
6CFJ|1|1A|C|933
6CFJ|1|1A|A|934
6CFJ|1|1A|C|935
6CFJ|1|1A|C|936
6CFJ|1|1A|A|937
6CFJ|1|1A|G|938

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1m

30S ribosomal protein S13