HL_6CFJ_223
3D structure
- PDB id
- 6CFJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GCUAGGGGGCCCACCAGCCUACCAAAC
- Length
- 27 nucleotides
- Bulged bases
- 6CFJ|1|1A|C|933, 6CFJ|1|1A|A|934, 6CFJ|1|1A|A|942
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6CFJ|1|1A|G|922
6CFJ|1|1A|C|923
6CFJ|1|1A|U|924
6CFJ|1|1A|A|925
6CFJ|1|1A|G|926
6CFJ|1|1A|G|927
6CFJ|1|1A|G|928
6CFJ|1|1A|G|929
6CFJ|1|1A|G|930
6CFJ|1|1A|C|931
6CFJ|1|1A|C|932
6CFJ|1|1A|C|933
6CFJ|1|1A|A|934
6CFJ|1|1A|C|935
6CFJ|1|1A|C|936
6CFJ|1|1A|A|937
6CFJ|1|1A|G|938
6CFJ|1|1A|C|939
6CFJ|1|1A|C|940
6CFJ|1|1A|U|941
6CFJ|1|1A|A|942
6CFJ|1|1A|C|943
6CFJ|1|1A|C|944
6CFJ|1|1A|A|945
6CFJ|1|1A|A|946
6CFJ|1|1A|A|947
6CFJ|1|1A|C|948
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1Q
- 50S ribosomal protein L16
- Chain 1Z
- 50S ribosomal protein L25
- Chain 1m
- 30S ribosomal protein S13
- Chain 1w
- Transfer RNA; tRNA
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