HL_6CFL_028
3D structure
- PDB id
- 6CFL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GCUUAGAAGCAGC
- Length
- 13 nucleotides
- Bulged bases
- 6CFL|1|1A|A|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6CFL_028 not in the Motif Atlas
- Homologous match to HL_7RQB_029
- Geometric discrepancy: 0.3698
- The information below is about HL_7RQB_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6CFL|1|1A|G|1109
6CFL|1|1A|C|1110
6CFL|1|1A|U|1111
6CFL|1|1A|U|1112
6CFL|1|1A|A|1113
6CFL|1|1A|G|1114
6CFL|1|1A|A|1115
6CFL|1|1A|A|1116
6CFL|1|1A|G|1117
6CFL|1|1A|C|1118
6CFL|1|1A|A|1119
6CFL|1|1A|G|1120
6CFL|1|1A|C|1121
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1Q
- 50S ribosomal protein L16
- Chain 1Z
- 50S ribosomal protein L25
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