HL_6CFL_050

3D structure

PDB id

6CFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

6CFL|1|1A|C|2167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CFL_050 not in the Motif Atlas

Homologous match to HL_7RQB_051

Geometric discrepancy: 0.2283

The information below is about HL_7RQB_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFL|1|1A|C|2165
6CFL|1|1A|U|2166
6CFL|1|1A|C|2167
6CFL|1|1A|C|2168
6CFL|1|1A|G|2169
6CFL|1|1A|G|2170

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains