HL_6CFL_131

3D structure

PDB id

6CFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GCUUAGAAGCAGC

Length

13 nucleotides

Bulged bases

6CFL|1|2A|A|1067, 6CFL|1|2A|G|1068, 6CFL|1|2A|A|1070, 6CFL|1|2A|G|1071, 6CFL|1|2A|C|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFL|1|2A|G|1063
6CFL|1|2A|C|1064
6CFL|1|2A|U|1065
6CFL|1|2A|U|1066
6CFL|1|2A|A|1067
6CFL|1|2A|G|1068
6CFL|1|2A|A|1069
6CFL|1|2A|A|1070
6CFL|1|2A|G|1071
6CFL|1|2A|C|1072
6CFL|1|2A|A|1073
6CFL|1|2A|G|1074
6CFL|1|2A|C|1075

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25