HL_6CZR_086

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_12326.2

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

10

Unit IDs

6CZR|1|1a|C|673
6CZR|1|1a|G|674
6CZR|1|1a|G|675
6CZR|1|1a|U|676
6CZR|1|1a|G|677
6CZR|1|1a|A|678
6CZR|1|1a|A|679
6CZR|1|1a|A|680
6CZR|1|1a|U|681
6CZR|1|1a|G|682

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1A

Large subunit ribosomal RNA; LSU rRNA

Chain 1g

30S ribosomal protein S7

Chain 1k

30S ribosomal protein S11