HL_6CZR_088

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases (A, C, G, U)

777U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_12326.2

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

10

Unit IDs

6CZR|1|1a|G|770
6CZR|1|1a|A|771
6CZR|1|1a|U|772
6CZR|1|1a|U|773
6CZR|1|1a|A|774
6CZR|1|1a|G|775
6CZR|1|1a|A|776
6CZR|1|1a|U|777
6CZR|1|1a|A|778
6CZR|1|1a|C|779
6CZR|1|1a|C|780

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1A

Large subunit ribosomal RNA; LSU rRNA

Chain 1k

30S ribosomal protein S11